Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX337507: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-248043' containing sample 'Clostridium orbiscindens 2_1_42A'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.7M spots, 540.8M bases, 322.4Mb downloads

UUID: 79eb3a8a-3f6b-4ce1-9bb4-93a7eaff6950

Design: Illumina sequencing of Ruminococcaceae bacterium 2_1_42A via random selection

Submitted by: Broad Institute (BI)

Study: Reference genome for the Human Microbiome Project

PRJNA46371 • SRP028954 • All experiments • All runs

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<b><i>Ruminococcaceae bacterium</i> 2_1_42A</b>. Reference genome for the Human Microbiome Project.

Sample: Generic sample from Ruminococcaceae bacterium 2_1_42A

SAMN00998673 • SRS335396 • All experiments • All runs

Organism: Ruminococcaceae bacterium 2_1_42A

Library:

Name: Pond-248043

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

gssr_id: 335299.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4DYKC

material_type: DNA:DNA Somatic

product_order: PDO-1171

product_part_number: P-MCV-0001

project: G37055

research_project: RP-208

root_sample_id: SM-27L6O

sample_id: SM-4DYKC

work_request: 36472

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-07-15 12:30:18.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 2.7M spots, 540.8M bases, 322.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR954934	2,676,990	540.8M	322.4Mb	2013-08-21

ID:: 474970

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